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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYSM_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLHKLRLAA AVPVTFSSRL FLKPFTNTLT LGLFSRHLQP RNKPLLVRAF SASAAVQDIP  60
   61 ATQTSDSSVA ARPLWKAAID FKWIRDNKEA VEINIRNRNS NANLEAVLQL YENMVNLQKE 120
  121 VERLREERNN VAKKMKGKLE PSERERLVEE GKNLKESLVT LEEDLVKLKD ELQHVAQSIP 180
  181 NMTHPDVPVG GEDSSAIRQE VGSPREFSFP IKDHLQLGKD LDLIDFDSAA EVSGSKFFYL 240
  241 KNEAVLLEMA LLNWTLSQVM KKGYTPLTTP EIVRSSIVEK CGFQPRGDNT QVYSIDGTDQ 300
  301 CLIGTAEIPV GGIHMDSILL ESALPLKYIA FSHCFRTEAG AAGAATKGLY RVHQFSKAEM 360
  361 FVICQPEDSE SFHQELIQIE EDLFTSLGLH FKTLDMATAD LGAPAYRKFD IEAWMPGLGR 420
  421 FGEISSASNC TDYQSRRLGI RYRPSEPPQT GPKKGKANLP ATKFVHTLNA TACAVPRMMV 480
  481 CLLENYQQED GSVVIPEPLR PFMGGIELIK PKHK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle