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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50748954
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVVSGGSRR RAEGRRAGRA PSASPPPAAF SVPPLRSPVP ACPCAAVAQR TGAERGQGAQ  60
   61 PTAVPPTTAC ATAGCYRKTA GVTFGACLVY LISFISGSRR QTFRPGWGGG ALSAGSPAAL 120
  121 PRSASAGVVR KHRRAVPNAV SQHDVRRLGG GSGAAEMAAG GALLRALGFA ALLLPALPRG 180
  181 SPGSAERRCF CQVTGHLDDC TCDVETIDAF NNYKLFPRLN QLLESDYFRY YKVNLKKPCP 240
  241 FWNDNSHCGI RDCAVKPCPS DEVPDGIRSA GYKYSEEANS HAEECEEANR LGAVDESLSK 300
  301 ETQQAVLQWT WHDDSSDSFC EADDIHSPDA EYVDLLLNPE RYTGYKGPDA WKIWNSIYEE 360
  361 NCFKPQNVKR PLTSGRGDDG GQMFYKWLKG VCVEKRAFYR LISGLHASIN IHLSARYLLQ 420
  421 DTWSEKKWGP NVTEFQQRFD EVVTRGEGPR RLKNLYFLYL IELRALSKVL PFFERPGFQL 480
  481 YTGNQSHDAE IKNLLLEVLH LAKSFPLHFD ENSFFAGNKK EAAKLKEEVR LHFKNISKIM 540
  541 DCVGCFKCRL WGKLQTQGLG TALKILFSEN LIEKIPESGP SYGFQLTRQE IVALFNAFGR 600
  601 ISTSVRELEN FRAILRTMR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle