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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TYW1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTSSVRVR LAFVALLSAT TFYCIHKYRR LKHLKNLSLN PSSTLKASRG KIFFISQTGT  60
   61 AKALAQRLHE LCASNDIAFD IVDPHSYEPE DLPKETLVLF IASTWDGGKP PKNGEFLVNW 120
  121 LGESAEDFRV GSLLLSDCKF AVFGVGSRAY GESYNAVAKE LSSRMIGLGG LEMIPVGEGD 180
  181 VDDGELDRAF QDWCDGVIRV LKGGSAQETN GVSQQIGAVE DDLEYYDSTD EEDEDNDADG 240
  241 GIVDLEDIAG KAPSKRNGVV KVTKVDGKKE MVTPVIRASL TKQGYKIIGS HSGVKICRWT 300
  301 KSQLRGRGGC YKHSFYGIES HRCMETTPSL ACANKCVFCW RHHTNPVGKS WQWKMDEPSV 360
  361 IVKGALDLHK NMIKQMKGVP GVTPEKLQEG LNPRHCALSL VGEPIMYPEI NALVDELHGR 420
  421 RISTFLVTNA QFPEKILMMK PITQLYVSVD AATKESLKAI DRPLFADFWE RFIDSLKALQ 480
  481 EKQQRTVYRL TLVKGWNTEE LDAYFNLFSI GKPDFIEIKG VTYCGSSATS KLTMENVPWH 540
  541 TDVKAFSEAL SLKSNGEYEV ACEHAHSCCV LLGRTEKFKV DGKWFTWIDY EKFHDLVASG 600
  601 EPFTSTDYMA QTPSWAVYGA QEGGFDPGQL RYKKERNHPP KPQAVLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle