YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50748316
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEERRYRSAS GAPLALRCRQ HSASCRELAV RCPRLQLRSL SAVTSAVWLA AYGLFVLCQN  60
   61 SMVLSAAIFL TLIGLIIYLH FVKIDQESLL VIGSLGIQVT SSYASGKEST TFIEMSQVKD 120
  121 VVINEAIHMQ KVIYYLCILL QDPQDPQGVS EVVPLFQSSQ PRLDCLIEVY KSCHEILDQR 180
  181 KAASQSDGVK

Type	Start	End	Confidence
Cytoplasmic	1	35	0.96
Transmembrane Helix	36	56	0.88
Non-Cytoplasmic	57	61	0.80
Transmembrane Helix	62	82	0.93
Cytoplasmic	83	190	0.83