YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110737096, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNLSSRRAS STLTLSFTVL LLASTGSYGS TFTFANRCGY TVWPGILSNA GSPTLSTTGF  60
   61 ELPKGTSRSL QAPTGWSGRF WARTGCKFDS SGSGTCKTGD CGSNAVECAG LGAAPPVTLA 120
  121 EFTLGTGGDD FYDVSLVDGY NIPMIVEVAG GSGQCASTGC TTDLNIQCPA ELRFGDGDAC 180
  181 KSACLAFRSP EYCCSGAYAT PSSCRPSVYS EMFKAACPRS YSYAYDDATS TFTCAGGDYT 240
  241 VTFCPSSPSQ KSTSYSPPVT DSSSTSQGSD PVPGSDTGYA GQGQQTPGQG NVYGSQGTGS 300
  301 EMGTGETMLQ DGSWMAGLAM GEASRPAGVS LTVLLAAFTF PFIFS

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	345	0.98