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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLG2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPQRKHSTA LHTCHPCRRT IPYRIYAVFH TCGIIALMYH HVHSIVNANN TLITCLLLLS  60
   61 DIVLAFMWAT TTSLRLNPIH RTEYPEKYAA KPEDFPKLDV FICTADPYKE PPMMVVNTAL 120
  121 SVMAYEYPSH KISVYVSDDG GSSLTLFALM EAAKFSKHWL PFCKNNNVQD RSPEVYFSSK 180
  181 SHSSSDEAEN LKMMYEDMKS RVEHVVESGK VETAFIACDQ FSCVFDLWTD KFTRHDHPTI 240
  241 IMVLQHNETE MMPNLIYVSR EKSKVSPHHF KAGALNTLLR VSAVMTNSPI ILTLDCDMYS 300
  301 NNPTTPLHAL CYLSDPKINF DLGFVQFPQK FQGVNKNDIY ASELKRPFDI NTVGFDGLMG 360
  361 PVHMGTGCFF NRRAFYGPPT TLILPEIETF GPNRIADKPI KAQDILALAH DVAGCNYECN 420
  421 TNWGSKIGFR YGSLVEDYFT GFMLHCEGWR SIFCSPTKAA FYGDSPKCLT DVIGQQIRWS 480
  481 VGLLEVAFSR YNPLTYGIKP LSLLMSLGYC HYAFWPFWCI PLVVYGILPQ VALIHGVSVF 540
  541 PKASDPWFWL YIILFLGGYA QDLSDFLLEG GTYRKWWNDQ RMWMVRGLSS FFFGFTEFTL 600
  601 KTLNLSTQGY NVTSKSNDDN EQMKRYEQEI FDFGPSSSMF LPITTVAIMN LLAFMRGLYG 660
  661 IFTWGEGPVL ELMLASFAVV NCLPIYEAMV LRIDDGKLPK RICFLAGLLS FVLTGSGYFF 720
  721 LK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle