YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	B3GTA_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL  60
   61 KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK SQGYLKKQKS VSSSGKKMLA 120
  121 VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN 180
  181 RATKDFLILE NHEEAQEELP KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR 240
  241 RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN 300
  301 SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA

Type	Start	End	Confidence
Signal Peptide	1	44	0.56
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	345	0.97