YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6552395
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTITSSF LTSPPSSLFN KSSSPSFHAT PTLRPLAPRA SMSASAPPYD FGSFRFDPIR  60
   61 ESIVSREMTR RYMIDMVTHA DTDVVIVGAG SAGLSCAYEL SKNPSINIAI VEQSVSPGGG 120
  121 AWLGGQLFSA MVVRKPAHLF LDELNVEYDE QDNYVVIKHA ALFTSTIMSK LLARPNVKLF 180
  181 NAVAAEDLIV KNGRVGGVVT NWALVSLNHD TQSCMDPNVM EAKVVVSSCG HDGPFGATGV 240
  241 KRLKSIGLID SVPGMKALDM NKAEDAIVRL TREVVPGMIV TGMEVAEIDG APRMGPTFGA 300
  301 MMISGQKAAH LALRSLGLPN ALDSVGNVHP ELVLAAAESA EIAEA

Type	Start	End	Confidence
Signal Peptide	1	18	0.64
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	345	0.98