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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50747948
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLVLSHQGF PGSGMQQHLT WHQCIEVFKL EYQATVRVVT LFLAVGQRRR ADRLYKANKQ  60
   61 RDPQPPVTVP SLAPIPPSAK DLGSAVGDCQ WCCSCRAMLQ RAGTQGAETP EFPALPCEGS 120
  121 VAKYGAFLPR SSCWIRIGSS LHHVTLPRFV LFGGAAPDPD VLSLLTPWLC SQPLLLAHHN 180
  181 ATRSAPWASL RRVVPSRAVP VRRSVPTATT YRAAVRWSER AVREETKEIG DREKGVWHSL 240
  241 RCVRIPARAD LALFRQDSGH TPRSRARRGT RRSSRPAMLN ARRPHAAPEG AGARQRGPMG 300
  301 VELRREGRVL ASRRANERRA SGAARNRRLR PSAAGGLGPA VGRAMEERGA EPEQRRFTWE 360
  361 EIAQRTGRGP AADERWLVID RKVYDISRFH RRHPGGSRVI SHYAGQDATD PFIAFHLDKT 420
  421 LVKKYMSPLL IGELAPDQPS FEPSKNKKLV EDFRELRATV EKMGLLKPNR TFFLLHLCHI 480
  481 LALDVAAWLT IWYFGSSTVP FLFSALLLGT VQAQAGWLQH DFGHLSVFSE SKWNHWVHKF 540
  541 VIGHLKGAPA SWWNHLHFQH HAKPNCFRKD PDVNMHPLFF ALGKKLSVEL GEQKKKFMPY 600
  601 NHQHKYFFII GPPALVPLYF QWYIFYFVVQ RKQWVDLAWM LTFYIRFFLT YLPLLGVKGI 660
  661 LGLHLLVRFI ESNWFVWITQ MNHIPMHIDY DKNVDWFSTQ LQATCNVRQS LFNDWFSGHL 720
  721 NFQIEHHLFP TMPRHNYWKV APLVKSLCAK HGIEYHCKPL LTAFADIVYS LKDSGELWLD 780
  781 AYLHK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle