YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50747942
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSYGKLLYS ELTHQSEKST IVSSAEKTVT QVAGGTVCQR PARGGEWGGS AAHKERRGRR  60
   61 VGVQSCARAP GPCSERPPGA AIGTASVGHF GVNRGTAISP PASSLRDTVV PQLKMQRCVG 120
  121 FLFLSLILCA ALSETFGLVL SAKEKRGWTL NSAGYLLGPR RIDHLLMIKE MPIARGREEA 180
  181 PGAYAVDNHR SFNDKHGFTG KREIQPDEDI KAGNLGRPLA DENIVRTVIE FLTYLHLKEA 240
  241 GALENLPSPE ETNLS

Type	Start	End	Confidence
Cytoplasmic	1	118	0.54
Transmembrane Helix	119	140	0.74
Non-Cytoplasmic	141	255	0.69