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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GUX8_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.45
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE  60
   61 HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV VIASLDVPLR WVQTLEEEDG 120
  121 AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC 180
  181 GRFCAVFINP CIFHTGLFVL QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP 240
  241 LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW 300
  301 PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT 360
  361 TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM ASFALSSISI NTLLLPTLPV 420
  421 LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL 480
  481 FPRLGDSGVT SGFSKLY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle