YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50747636
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLLPCVTL ALMGLLFSRS MAWTSSGKTH PELVNNLYKK GIIKSQRVFD VLLATDRGHY  60
   61 IKYFPYMDSP QSIGYKATIS APHMHAHALE LLKDQLVEGA KALDVGSGSG YLTACFARMV 120
  121 GPTGKAVGVE HIKELVNESI RNVKEDDPTL LSSGRVKLVV GDGRQGYPEE APYDAIHVGA 180
  181 AAPTVPQELL NELKPGGRLI LPVGPEGANQ VLMQYDKTSD GQIIETQLMG VIYVPLTDKE 240
  241 KQWPRDEF

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	248	0.99