YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BGAL3_ARATH
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST  60
   61 PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR NDLVRFVKTI HKAGLYAHLR 120
  121 IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP 180
  181 IILSQIENEY GRQGQLLGAE GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF 240
  241 YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH 300
  301 GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT 360
  361 SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY NLPPWSISIL PDCRNAVFNT 420
  421 AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM 480
  481 TSVDIGDSES FLHGGELPTL IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS 540
  541 GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM 600
  601 NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES 660
  661 IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH VPRAWLKPSQ NLLVIFEELG 720
  721 GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK 780
  781 FASFGTPLGT CGSYQQGECH AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT 840
  841 VEAVCAPETS VSTWRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle