YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17380736, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGDHGHGA EGGDFRAKVW SMTGGPNCRP KHWRRNTAIA MFGVFLVCIP IAKLSAKLEQ  60
   61 RPHMPVRPIP SQIWCKNFGT KDDYEKEH

Type	Start	End	Confidence
Cytoplasmic	1	36	0.78
Transmembrane Helix	37	56	0.85
Non-Cytoplasmic	57	88	0.88