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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50746879
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFIMKLHRH FQRTVILLAT FCMVSIVISA YYLYNGYKQE NELSEISSEV ECGDLPLFPY  60
   61 KLMEMKTMKP IDPLRTDLVV LVFVESQYST LGQDIITILE SSRYQYHIEI ASGKGDLPVL 120
  121 IDKNKGKYAL IVYENILKYV NMDSWNRGLL DKYCVEYGVG VIGFYKGNEN SLQSFQLKGF 180
  181 PFHIHSNLGI KDCCINPYSP LLHVTKSSKL EKGPLLGNDW AIFQINHTAY QPVIFAKVKT 240
  241 PENLLPPAAK SALHATVIHD LGLHDGIQRV LFGNNLNFWL HKLIFIDAIS FLSGKKLKLS 300
  301 LDRYLLVDID DIFVGKEGTR MNANDVQALL DTQNLLRTQI TNFTFNLGFS GKFYHTGTEE 360
  361 EDEGDDLLLR SVDEFWWFPH MWSHMQPHLF HNESSLVEQM ILNKKFALEH GIPTDMGYAV 420
  421 APHHSGVYPV HVQLYDAWKK VWNIRVTSTE EYPHLKPARY RRGFIHKNIM VLPRQTCGLF 480
  481 THTIFYKEYP GGPKELDKSI QGGELFFTVV LNPIIALQGD CVTCTNLSRA VCSKATRKTW 540
  541 IALLEEWMRV RARGWFFLQL PSALVNFLIQ ENLDVSGDSW QRVLVRIPNI IRDNNEEESK 600
  601 TEIEVCPFIL RKEYRSAEKQ LKGTEDTAVC KALPLGVPQE QQQCLISIFM THLSNYGNDR 660
  661 LGLYTFVNLA NFVHTWTNLK LQTLPPVQLA HKYFELFPEQ KDPLWQNPCD DKRHRDIWSK 720
  721 EKTCDRLPKF LVVGPQKTGT TALYLFLIMH PSIISNSPSP KTFEEVQFFN RNNYHRGIDW 780
  781 YMDFFPTPSN VTTDFLFEKS ANYFHSEEAP KRAASLIPKA KIITILIDPS DRAYSWYQHQ 840
  841 RSHEDPAALK FSFYQVITAG PRAPSELRAL QKRCLAPGWY ATHIERWLTY FPPYQLLIID 900
  901 GQQLRTDPST VMDEVQKFLG VSPHYNYSEA LTFDSHKGFW CQLLEEGKTK CLGKSKGRKY 960
  961 PPMDSECRAF LSSYYRDHNV ELSKLLHKLG QPLPSWLRQE LQKVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle