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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20259322
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETYLKLLLRV THFLLLLLSL SFFFVFDHRR QNSMSSTYKL NHTDSFANGD AKSLLPNPEN  60
   61 GFTHLTSLAQ SEKAVQELLL QQTPMQATDD HLVEFSEALR TVAKALRGAA EGKALAQAEA 120
  121 AEWKRRYELE RSKNVELQHK ELSNGVCADE SNGQRMEHLA KSPRLYAQEI SSNGMETICS 180
  181 HEVLQDGGFN SFNNKLKRKA SFKLSWGCKG IANDQHKKEI VSFERGNIST AERSSKQISL 240
  241 TWESDPQTVL IITKPNSTSV RVLSVDMVRW LRTQKGLNIY VEPRVKEELL SESSSFNFVQ 300
  301 TWEDDKEISL LHTKVDLLIT LGGDGTVLWA ASMFKGPVPP IVPFSMGSLG FMTPFHSEQY 360
  361 RDCLEAILKG PISITLRHRL QCHIIRDKAT HEYEPEETML VLNEVTIDRG ISSYLTNLEC 420
  421 YCDNSFVTCV QGDGLILSTT SGSTAYSLAA GGSMVHPQVP GILFTPICPH SLSFRPLILP 480
  481 EHVTVRVQVP FNSRSSAWVS FDGKDRKQLE AGDALVCSMA PWPVSTACQV ESTNDFLRSI 540
  541 HDGLHWNLRK TQSADGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle