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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28827260, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMTIWSLCL ILSLSNSKLV LASHVKHLCR QDQKNALLEF KNEFYVHEFN SNGIVGVKKT  60
   61 EKWRNNTDCC SWDGISCDPK TGKVVELDLM NSFLNGPLRY DSSLFRLQHL HNLDLGSNNF 120
  121 SGILPDSIGS LKYLRVLSLG DCNLFGKIPS SLGNLTYLTN LDLSVNDFTG ELPDSMGHLN 180
  181 KLTELHLGSA KLSGNFPSML LNLSELTLID LGSNQFGGML PSNMSSLSKL VYFGIDRNSF 240
  241 SGSIPSSLFM LPSLTSLVLG RNDFNGPLDF GNISSPSNLG VLSLLENNFN GPIPESISKL 300
  301 VGLFYLDLSL WNTKRGMVDF NTFLHLKSLT FLDLSYINTR SMVDISIFSP LLSLGYLDLS 360
  361 GINLKISSTL SLPSPMGTLI LSSCNIPEFP NFLENQTTLY YLDISANKIG GQVPQWLWSL 420
  421 PELQYVNISQ NSFSGFEGPA DVIQRCGELL MLDISSNTFQ DPFPLLPNST TIFLGSDNRF 480
  481 SGEIPKTICK LVSLDTLVLS NNNFNGSIPR CFEKFNTTLS VLHLRNNNLS GEFPEESISD 540
  541 HLRSLDVGRN RLSGELPKSL INCTRLEFLN VEDNIINDKF PFWLRMLPKL QIFVLRSNEF 600
  601 HGPISSLGDS LSFPKLRIFD ISENRFNGVL RSDFFAGWSA MSSAVDIVDI MPSRYAGRDS 660
  661 GNYYNSVTMT VKGSIIELVG SVFTIYKTID VSGNRFEGRI PESIGLLKEL IVLNMSNNG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle