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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30683790, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNIKSPLRL FIEESIKELI RGFRRQRIKW RNAFLLGSIM TTIVVLLHTP TFSVFSDEEE  60
   61 TESSSSSPIY LNGSLHLNIH IVSSEAKVEN FHTLRTRTPI VQLNASEASE AVLSRKRRKR 120
  121 KKRKKTKDDL ILTDPPPAPR HVLSSSERRA LSLPPKKALT YAKLEIQRAP EVINDTDLFA 180
  181 PLFRNLSVFK RSYELMELIL KVYIYPDGDK PIFHEPHLNG IYASEGWFMK LMESNKQFVT 240
  241 KNPERAHLFY MPYSVKQLQK SIFVPGSHNI KPLSIFLRDY VNMLSIKYPF WNRTHGSDHF 300
  301 LVACHDWGPY TVNEHPELKR NAIKALCNAD LSDGIFVPGK DVSLPETSIR NAGRPLRNIG 360
  361 NGNRVSQRPI LAFFAGNLHG RVRPKLLKHW RNKDEDMKIY GPLPHNVARK MTYVQHMKSS 420
  421 KYCLCPMGYE VNSPRIVEAI YYECVPVVIA DNFMLPFSDV LDWSAFSVVV PEKEIPRLKE 480
  481 ILLEIPMRRY LKMQSNVKMV QRHFLWSPKP RKYDVFHMIL HSIWFNLLNQ NQTSFDDHIP 540
  541 DS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle