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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50745473
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPINSLHNF STSEARNGSG ELGCGALCWG LTGRGAQRAG ARSKSAALAL PVAYLLCLQH  60
   61 PRADSSEPHH GTFLGDAAPE LRRQRGQKGI AEKPAPYFRV IMPSLFSIIC FLGVVGNLIV 120
  121 ISTIVKKKKL KRNQTVPDIF IFSLSIVDLL FLLGMPFLIH QLLGNGSWYF GATLCTIITA 180
  181 LDNNSQITST NILTVMTLDR YLATVYPLGS TYVRTPCVAA LVICLVWLLS FLTVIPVWMY 240
  241 AGLMPLADGT VRCALLLPNP ETDIYWFTLY QFMLPFAMPL IVICVGHLQI LQHITTTVVP 300
  301 LPQRSLQPSE APGGVLSSHS APPVLGPRGG RKERPAVCTH GAGLLALPEV ESSERSRASW 360
  361 RSCGQKEFVP DGSTEQAERL RLCLEEQWRQ LAEERVERPG NLVKAVWKPE QSVVELESPA 420
  421 GKFWHTMGFS ERGKQCLLPE EALYLLECGS LQLFYKDVPM SVREAYEILL SQEAMNLLHY 480
  481 QVFSHLKQLG FIVLRFNPST VLSPYERQLN LESHCKSSGK HHHKRRRSSS PGSCEKKHKV 540
  541 SEDLPKAEGT CEKGGDDCGE FSCIPLDEKP LSEQLKELDT GNGEEQSVTS NSVPLDTGRK 600
  601 NAPRLSWSLG TGDQKASSTG TRVPHWDFTT IFLPNVASDQ PCIHLPAPDS KLLPENVPGR 660
  661 EVDAASWCRR INQKQERLTQ KEREQWERES KYKSSISADR EVRCCMNWQE YKALLRWRSQ 720
  721 QRVWRQPLHP WDQAVTPLLQ PEEATSLAAV RQQISVLQPS HILDGASWLQ EGLESIKIDF 780
  781 NVYQADAVAK FKKTNPGKPY VRMCVQSFDE QIPIPSGFEA GYMSEWGRPS GLCSGGPRRN 840
  841 CLLLAKGIQV AS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle