YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50745288
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLPSSAARP PQAPRLRRLR RMRRAPNLFH GAVRMRTHRA PALTALRLRT VLAALARGWA  60
   61 GPAVASGVPF PSPLFLRRNS NSFAAKMPRI MIKGGVWRNT EDEILKAAVM KYGKNQWSRI 120
  121 ASLLHRKSAK QCKARWYEWL DPSIKKTEWS REEEEKLLHL AKLMPTQWRT IAPIIGRTAA 180
  181 QCLEHYEFLL DKAAQRDNEE ETADDPRKLK PGEIDPNPET KPARPDPIDM DEDELEMLSE 240
  241 ARARLANTQG KKAKRKAREK QLEEARRLAA LQKRRELRAA GIEIQKKRKK KRGVDYNAEI 300
  301 PFEKKPAPGF YDTSEENYQI LDADFRKLRQ QDLDGELRSE REGRERKKDK QHMKRKKESD 360
  361 LPSAILQTSG VSEFTKKRSK LVLPAPQISD IELEEVVKVG QASEIARQTA EESGITNSAS 420
  421 STLLSEYSVT NNSIALRTPK TPAAQDRILQ EAQNLMALTN VDTPLKGGLN TPLHESDFSG 480
  481 VTPQRQVVQT PNTVLSTPFR TPSQGQEGLT PRGGLTPKPV AGTTPGRTPL RDKLNINPEE 540
  541 GMADYSDPSY AKQMERESRE HLRLGLMALP APKNDFEIVL PENAEKELEE PEVDEAFVED 600
  601 TADIEARKQA LRDAERAKEL KRMHKAVQKN LPRPSEVNET VLRPVNVEPP LTDLQRSEEL 660
  661 IKKEMITMLH FDLLHHPFGE QPTGKKGKGP GFGTNNAEHM AYLEQNPYEK FSKEDLKKAQ 720
  721 DLLAQEMEVV KQGMGHGELS SEAYNQVWEE CYSQVLYLPG QSRYTRANLA SKKDRIESLE 780
  781 KRLEINRGHM TTEAKRAAKM EKKLKILLGG YQSRAMGLIK QLNDLWDQIE QAHLELRTFE 840
  841 ELKKHEDAAI PRRLECLKED VQRQQEREKE LQQRFADFML DKETFQSKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle