YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28611029
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAALLRRS PAARALLSPA LSSRLVASKP HSSSPAPPPP SSKPASTKTF SIYRWDPDSP  60
   61 STKPHLKDYK VDLSDCGPMV LDALLKIKNE QDPSLTFRRS CREGICGTCA MNIDGDNGLA 120
  121 CLTKISSEAA GASTISPLPH MFVVKDLVVD MTNFYNQYKS VEPWLKRKDP PAAGGKEIYQ 180
  181 SKADRAKLDG MYECILCACC STSCPSYWWN PEEYLGPAAL LHANRWIQDS RDEFTKERLD 240
  241 SINDEFKLYR CHTIKNCTHA CPKGLNPAKQ IDTIKKLQLG A

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	281	0.99