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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50744984
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.24
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHGIRHLLI YCLLQVPELW IPLRAWTGSP SFPGIFASTL QTRWSTKRPV VTALRLSQHY  60
   61 ADNERGQKLI QQEDFAIEMV TLARAACFNF ALVLLEKEYP VPPVGTELRA NGKCSCWDQR 120
  121 HSLHFIVFKS EISSGGRECV TALSLAGTGS GDVLSPILHC IHTNVHAVCQ IPLLSEQVLL 180
  181 DILPEQDVVV STIYWSWRSI VWQQFKARTL LTLFGVCTCY VQKRFRTHAA HSEKETIPTL 240
  241 RSLQFEVVKQ CQGYSSISLP RYFARGFVGR VHGSCWVLAC PRCQEQQHKQ RRGCKPAVYS 300
  301 IIFYYSGRKA GASFEACTNL GRRNHNVLPE RQLFGKTFEG SDFLDSHLTI VGFQTAAVFL 360
  361 FEWSHVESPA LSWSQLFIVT FWTGIPIAFC RSFRSSVAAI GHIQGEHLRC YEWQTHFLMI 420
  421 ETEGTGVALR KLAQQLFWGV VLQNGLRFLP SGEKQVVEWT WPKAPRCVVS GGYPETAFLL 480
  481 LSGAEAEVPL AFLCCLTGAG ELCQGSLVPK LSIAIAFQFF HLHCIEYQWC LAVVYDSSVK 540
  541 EHYCRMERLD KTINSYLDVW LGPRDPRVKG WLLLENYTPT FIFSVLYLLI VWLGPKYMRN 600
  601 KQPFSCRGIL VVYNLGLTLL SLYMFYELVT GVWEGGYNFY CQDTHSGGEA DMKIIRVLWW 660
  661 YYFSKLIEFM DTFFFILRKN NHQITVLHVY HHATMLNIWW FVMNWVPCGH SYFGATLNSF 720
  721 IHVLMYSYYG LSAVPAMRPY LWWKKYITQG QLIQFVLTIF QTSCGVVWPC AFPQGWLYFQ 780
  781 IFYMISLIIL FTNFYIQTYN KKASSRRKEY QNGSTATVNG YTNSFSSLEN NVKQRKQRKD 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle