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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50744908
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPGLCLLL LLLSSARLAP PASAQPPPQR GSVWCPSRCL CFRSTVRCMH LMLESVPAVS  60
   61 PQTTILDLRF NRIKEIQPGE FRRLKNLNTL LLNNNQIKRI PSGAFEDLEN LKYLYLYKNE 120
  121 IQSIDRQAFK GLASLEQLYL HFNQIETLDP ESFTHLPKLE RLFLHNNRIA HLIPGTFSHL 180
  181 ESMKRLRLDS NALHCDCEIL WLAELLKTYV ESGNAQAAAT CEYPRRIQGR SVATITPEEL 240
  241 NCERPRITSE PQDVDVTSGN TVYFTCRAEG NPKPEIIWLR NNNELIMKED SRLNLLDDGT 300
  301 LMIQNTQETD QGIYQCMAKN VAGEVKTQEV TLRYFGSPAR PSFVIHPQNT EVLVGESVTL 360
  361 ECSATGHPQP QITWTKGDRT PLPSDPRITI TPSGGLYIQN VKQEDSGEYT CFATNSIGNI 420
  421 HATAYIIVQA LPQFTVTPQD KTVIEGQTVD FPCEAQGYPQ PVIAWTKGGG QLSVDRRHLV 480
  481 LSSGTLRISR VALHDQGQYE CQAVNIIGSQ RIVVYLTVQP RVTPVFASVP SDMTVEVGTN 540
  541 VQIPCSAQGE PEPVITWNKD GVQVTESGKF HVSPEGYLTI RDVGTADEGR YECVARNTIG 600
  601 YSSVSMVLSV NGKVYARPRS PNDLLALFRY PRDPYTVEQA RAGEIFERTL QLIQDHVQDG 660
  661 LMVDLNGTSY HYNDLVSPQY LNLIANLSGC TAHRRVNNCS DMCFHQKYRT HDGTCNNLQH 720
  721 PMWGASLTAF ERLLKSVYEN GFNLPRGIEP RRLSNGYALP MPRLVSTTLI GTETITPDEQ 780
  781 YTHMLMQWGQ FLDHDLDLTV AALSEARFSD GQHCSSVCTN DPPCFSIMIP PNDPRVRNGA 840
  841 RCMFFVRSSP VCGSGMTSLL MNSVYPREQI NQLTSYIDAS NVYGSSDHEA LEIRDLASQR 900
  901 GLLRQGIVQR SGKPLLPFAT GPPTECMRDE NESPIPCFLA GDQRSNEQLG LTSIHTLWFR 960
  961 EHNRIATELL KLNPHWDGDT IYHETRKIVG AEMQHITFSH WLPKIFGEVG MKMLGEYKGY1020
 1021 DPSVNSGITN EFATAAFRFG HTLINPFLYR LDENFEPIPQ GHLPLHKAFF SPFRIVNEGG1080
 1081 IDPLLRGLFG VAGKMRVPSQ LLNTELTERL FSMARTVALD LAAMNIQRGR DHGIPPYHDF1140
 1141 RVYCNLSSAQ TFEDLKNEIK NPEIREKLSR LYGSPLNIDL FPALMVEDLV PGSRLGPTLM1200
 1201 CLLSTQFRRI RDGDRLWYEN PGVFTPAQLT QIKQTSLARV LCDNGDNITR VQHDVFKVAE1260
 1261 FPYGYSSCED IPKLDLRMWQ DCCEDCRTRG QFNAFSYHFR GRRSLDYSFQ EDKPLKKMKM1320
 1321 SKTVSSVKQS KYFRNATSAS DENANVPIVN DFKEFVLEMQ KTISSLRSQI KKLESRLCKT1380
 1381 DCTDEKGKSY SSNETWKRDP CTVCECKVGQ ITCFVESCPP VDCEAPVKAK GDCCPVCVKE1440
 1441 SINKKKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle