YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50744874
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLSQGVVSA KELQGAAGVC RKVETHISHR RRLRHIQPTL PDESTTRHQP HAHQGLLHHI  60
   61 AVGGFWHFDT GGTVEKSLAE TKDLLTGADP PPQGCSRSFP RQQPTLLEPR AAAAQPRGNP 120
  121 ALPPRFCQAP QSSVHPSRRH DGSTNPSNPS LLAHRRTEAG KALSTDRREG GGRRAEGGAE 180
  181 GGRRAVGRGG ETERAGTMAV DWIGFAYAAL LAVGGVIGYT RKGSKISLAA GLTFGSVAGY 240
  241 GAYCVTRDPR NVKISLFSAF LLTVIMGMRF KRSKKLMPAG LVACLSLLMI LRLVFMLL

Type	Start	End	Confidence
Cytoplasmic	1	197	0.73
Transmembrane Helix	198	219	0.89
Non-Cytoplasmic	220	225	0.60
Transmembrane Helix	226	246	0.87
Cytoplasmic	247	275	0.51
Transmembrane Helix	276	296	0.93
Non-Cytoplasmic	297	298	0.62