YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50744630
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRSPESGP ASAICRRARA GTDRVPLVEN HSFCCDHDYA SFDCSSRIYR APANSMWQMQ  60
   61 QEGKPGRGSA VSFAVAAVGS AAASARHAAK QQQKGMGTAV GTALAARLGL GLLLLALLLP 120
  121 AQIYCDPNGT SPTPSNNSSA SSTLPAAVNS LNSTTAHGHG NALHSTTSLL FILSVSLLYF 180
  181 CC

Type	Start	End	Confidence
Cytoplasmic	1	102	0.53
Transmembrane Helix	103	124	0.85
Non-Cytoplasmic	125	161	0.88
Transmembrane Helix	162	181	0.88
Cytoplasmic	182	182	0.93