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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50744620
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDELFPSVLV LHGASALWQG RGVQLAASIL QTLCILLGNV SESKHGLISV AKPFLSFDHQ  60
   61 FVKDRCFLLV CYVQCSVIFL FQNFAENTMN ELLGWYGYDK VELKDGEDIE FRNYSADGES 120
  121 RQHISVLKEN SLPKPKLPED SVISPYNINT SYPGLATGNG LSDSPAGSKD HGNVPIIVPL 180
  181 IPPPFIKPPA EDDVSNVQIM CAWCQKVGIK RYSLSMGSEV KCFCSEKCFA ACRRAYFKRN 240
  241 KARDEDGHAE NFPQQHYAKE TPRLAFKNNC ELLVCDWCKH IRHTKEYLDF GDGERRLQFC 300
  301 SAKCLNQYKM DIFYKETQAN LPAGLCSTLH PPVENKAEGT GVQLLTPDSW NIPLADARRK 360
  361 APSPASAAGQ IQGPGPSAST TASPSDTANC SVTKIPTPVP KPIPISENPN IPPVSVQPPA 420
  421 SIVPPIGVPP RSPPMVMTNR GPVPLPIFME QQIMQQIRPP FIRGPPHHAS NPNSPLSNPM 480
  481 IPGIGPPPGG PRNMGPTSSP MHRPMLSPHI HPPTTPTMPG NPPGLLPPPP PGAPLPSLPF 540
  541 PPVSMMPNGP MPMPQMMNFG LPSLAPLGPQ DGVIDLTVGH RSRLHNVIHR ALHAQVKVER 600
  601 EPNSVVNLAF GSSDKRNCSD CRDNCSPVDS KTLPCGDAAH CCPVSLASGT PGLEAGAAVC 660
  661 NVIVNGTKST EGSKNPEPPQ DPKKPQPPEE LAVSELESVK ENNCASNCHL EGDTGKKAGE 720
  721 EPLAGGDKQD PNLNNPADED HAYALRMLPK TGCVIQPVPK PAEKTAIAPC IMSTPILSTG 780
  781 PEDLEPPLKR RCLRIRNQNN TPSVSSLITL SLTEHFVMVL AVRCSPPFTS AGNNQSRGAA 840
  841 GPVFLYYIFL AFKKPICKDR TQDSELLCLH TGDKCWARNA RRQGTLHGER EQSKPYRSTK 900
  901 RHQLLFSLTA AHFALLLREM LNPSYPAQLS TRIKKQYRAV KGENVWETPG MLGYQAAASY 960
  961 YVCNSFFHLV FILDRVSAFP ALSSSSTLPP VCSSRTDGAV QQVTTPAEMS QQADHNPSRC1020
 1021 LQFIGQMRAP QTSEIPAPQM WNLATRHELH KAPSCPAGLG LPEEQKRDEP PPQVSLHAHS1080
 1081 HGERRVDRQA GRPASRAPPG GRRTGQPPTR EHRPRVGPFF PGGSARGAAP PALWRHLAVL1140
 1141 PRSCRPRARS CPGRQCEGPC KATGSLAAAL APPSPKPALA AGWPRPPSPP RAGALPGSHK1200
 1201 VSAAGRAGGR RGTRQTAALW GALPHPSRPG SLRRDSGLGS NRRDRAGRSL PLRAGAEDEA1260
 1261 SPLRFCSSVQ NGSGTITPWC GSKAIIPYVP AAKRSKTPVR DGALPDVLLG YGTSMRLSRL1320
 1321 KDDEVLGMLK EPITGEFLLS STAENPQRFG SLLSEKCKLS STEPAATTPN KQEKVSGSGS1380
 1381 MDWKAVCNYR KDRGNVCRDL PTFFSERVQI QDPISW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle