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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50744618
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQQFQYDD SGNTFFYFLT SFVGLIVIPA TYYLWPRDQH AEQIRLKNIR NVYGRCLWYR  60
   61 LRLLKPQQNI IPTVKKIILL AGWALFLFLA YKVSKTDREY QEYNPYEVLH LDPGASISEI 120
  121 KKQYRALSLK YHPDKGGDEV MFMRIAKAYA ALTDEESRKN WEEFGNPDGP QATSFGIALP 180
  181 AWIVDQKNSI LVLLVYGLAF MVILPVVVGS WWYRSIRYSG DQILIRTTQI YTYFVYKTRN 240
  241 MDMKRLIMVL AGASEFDPQY NKDATSRPAD NVQIPQLIRE IGGINLKKNE PPLTCPYSLK 300
  301 ARVLLLTHLA RMKVPDTLEE DQQFILKKSP ALLQEMINVI CQLIIMARSR EEREFRAPSL 360
  361 GSLENCMKLS QMTVQGLQQF KSPLLQLPHI EEDNLRRVSN HKKYKIKSIQ DLVSLKGSDR 420
  421 RNLLHFLEDK KYDEVMAVLG SFPYVTMDIK PQVLDDEDSN NITVGSLVTV LVTLTRQTMA 480
  481 EVFEKEQSIC SAEEQPAEDG QGDSNKVKSK GWQQKNKGTK KASKSKKKKP LKKKPVPPSL 540
  541 QPPKQQKQKQ ANGEVVVKEE EEEISDKGSE SEEEETNRDS QSEKDDGSDR ESDREQDEKQ 600
  601 NKDDEAEWQE LQQSIQRKER ALLETKSKIT HPVYSLFFPE EKQEWWWLYI ADRKEQMLIC 660
  661 MPYHVCTLKD KEEVELKFPA PGKPGNYQYT VYLRSDSYMG LDQIKPLKLE VHEAKPVPEN 720
  721 HPQWDTAIEG DEDQEDSEGF EDSFEEEEEE EEDDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle