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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17381092
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIRSSGRKL SFEILSQNSS FENDDTSIRR SSSDPITGNV ASESPRDYGK RKRSKKKKKK  60
   61 VNQVETILEN GDSHSTIITG SSGDFGETTT MFENRLNYYG GGGSGSSGGG CVVTLLDGQT 120
  121 VHHNGFNFGE LRQRNVNGSV DGSNDERWSD TLSSDKKLYM EETSVELSPS ENPPFQEVQH 180
  181 QFPRSEINGN VVRRLDTEAS LDWKQLVADD PDFLSAETRS PMKYLMEEIY GGISLRSTTT 240
  241 PGNDIERERI YDTIFRLPWR CEVLIDTGFF VCVNSFLSLL TVMPIRVLLI FMDAFKNRQF 300
  301 RRPSASELSD LACFLVLATG TILLGRTDIS LIYHMIRGQS TIKLYVVYNI LEIFDRLCQS 360
  361 FCGDVFGALF SSAKGLSISP PEKLRFSTWR FVSDLALTMA ASILHSFILL AQAITLSTCI 420
  421 VAHNNALLAL LVSNNFAEIK SSVFKRFSKD NIHGLVYADS IERFHISAFL VSVLAQNILE 480
  481 SEGAWFGNFI YNATTVFFCE MMIDIIKHSF LAKFNDIKPI AYSEFLQALC EQTLNIRPED 540
  541 RKTNLTFVPL APACVVIRVL TPVYAAHLPY SPLPWRMLWM VILFVITYIM LTSLKVLIGM 600
  601 GLRKHATWYI NRCRRRNSSH LHND

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle