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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50741704
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLRRVLSG QDDEEQGLTA QVLDASTLSF GTRVKWFAIC FIAGVACSIL GTALLWLPKG  60
   61 IKLFAVFYTL GNIAALASTC FLMGPLKQLK TMFEPKRLIA TVVMLWNKKG LALIFCILQF 120
  121 LAMTWYSLSY IPYASMTVQT VRSRCATRFC ACEGTAVRLS LPVLCADGTR CGTGRRRCAR 180
  181 GCAGPLGERE QSPGGNSVGH EGVRTVPVFP HRVLCSAGSE AHAPLCLLNR VCTWSRCIRQ 240
  241 FPAASPRSSA LTMAQLLPSV MYAGWLLGRF FPRVEARRTA AELELSPSLA WPWLTRDVRL 300
  301 SAAAFFSTAA RTELNNELFC PLVPVQQLMF AVAACDMVLH GNPSVHTCSR HRAGVHTAAT 360
  361 KAAPVLLIWL WLLPNVCAAA LTGCARLEHE RSKHEKCLRT CERAHLQNLC LRLCEALLMW 420
  421 VLVSDLDFFL HVCSAVYFSS SFDIESGISQ QGMRGVFERA KQHRFCREPL RGGLSLLCRL 480
  481 LCVPAALGAR RSVPISTAGL PSLQVLSCSV LGTLEKDVSP VPKAFGDLAL QGSNQASNQL 540
  541 GKLTAGSYKD TLHMSIHVKA HTITQKQCCV HLNPEMLQVV ITRCLQNATL KVARTEVPAE 600
  601 GCLEHTNLFA SVENECSIHD LFGIIDVMVS GQMQQTSGNT EWGFVGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle