YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17104687, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFVIPKLPF TLSLFLSLSF LIIFLFAFPT TFLRRPLSSS SSVTSVADEG IRIRHHGYSS  60
   61 YEAYIKHQLN KTQNPKLRKV WTTRDWDRKV RVFSTFFRRL SDRGLLSNQS KALSIGARVG 120
  121 QEVAALRLIG VEDSVGIDLV PRPPLVVKGD FHAQPFDEET FDFEFSNVFD HALYPEKFVG 180
  181 EIERTLKPGG VCVLHVSISG KTDKYSANDL LSVKPLVKLF KRSKVVEMRK IDGFGLDTEI 240
  241 VFRKNMN

Type	Start	End	Confidence
Cytoplasmic	1	9	0.59
Transmembrane Helix	10	32	0.60
Non-Cytoplasmic	33	247	0.98