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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16604671
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGIRLHVIA PLALAAVSKC ARDPAVYVRR CAANALPKLH DLRLEEHASA IEELVGILLN  60
   61 DHSPGVVGAA AAAFTSICPN NFKLIGKNYK KLCQILPDVE EWGQILLIGT LLRYVVARHG 120
  121 LVRESLMLSI HGTNSNGFCE KDGLGRDLTL DKEDGGKSDS FDVNLVSLVS KCYIQGPDEY 180
  181 LSRSSCTDTV SSAFDTKETT SIAHNEDVKI LLQCTSPLLW SNNSAVVLAA AGVQWIMAPL 240
  241 EDVKKIVKPL LFLLRSSSAS KYVVLCNILV FAKAVPSLFA PHFENFFICS SDAYQVKAYK 300
  301 LEMLSLIATT SSIASILREF EDYIKDPDRR FAADTVAAIG LCAKRLMTIP TTCLDGLLAL 360
  361 VRQESFAGDF ESADGEAGVL VQAVMSIQTM IERDPLRREK VLIQLFRSLD SIKVAAARAT 420
  421 IIWMVGVYCS LGHIIPRMLT TITKYLAWSF KSEASETKLQ ILNTIAKVLI SAEAGDFHML 480
  481 KRIVVYVFEL GEYDLSYDIR DRTRFLKKLL SCKLASHEPA EDSVASQENI AAHVVEHVFG 540
  541 RKLKSVSPIT LHNRFYLPGS LSQIVLHAAP GYEPLPKPCS FVYEEQDQLS DLDKQREAAA 600
  601 DLDGSEESSE TGDENGSSDY DSESSNGSDF SSEGDERTVS NDANDPAAPL IQISETSVSA 660
  661 DQEELRSRRA LDLWLDDQPS TSNQTPSALN SNQSSYAKIS IGDVGSRVKP KSYSLVDPGN 720
  721 GSGLKVDYAF LSEVSNVSPL HVCVEVLFEN SSAEPILEVN LEDGESMKVA DSSEQTLVGK 780
  781 ANASYNNIPT LIPMEEISCL EPHQSTKRLI QVRFHHHLLP MRLTLHYNEK KVPVKLRPDL 840
  841 GYLVKPFSMS IEEFLATESR LPGMFEYSRR CTFDDHVKDS RTENGKDKFL SICESITLKV 900
  901 LSNSNLHLVS VDLPVANSLE DATGLRLRFS SKILSSEIPL LITITVEGKC TEVLNLTVKI 960
  961 NCEETVFGLN LLNRIANFMV EPSSSAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle