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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VPEG_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTMTRVSV GVVLFVLLVS LVAVSAARSG PDDVIKLPSQ ASRFFRPAEN DDDSNSGTRW  60
   61 AVLVAGSSGY WNYRHQADIC HAYQLLRKGG LKEENIVVFM YDDIANNYEN PRPGTIINSP 120
  121 HGKDVYQGVP KDYTGDDVNV DNLFAVILGD KTAVKGGSGK VVDSGPNDHI FIFYSDHGGP 180
  181 GVLGMPTSPY LYANDLNDVL KKKHALGTYK SLVFYLEACE SGSIFEGLLP EGLNIYATTA 240
  241 SNAEESSWGT YCPGEEPSPP PEYETCLGDL YSVAWMEDSG MHNLQTETLH QQYELVKRRT 300
  301 APVGYSYGSH VMQYGDVGIS KDNLDLYMGT NPANDNFTFA DANSLKPPSR VTNQRDADLV 360
  361 HFWEKYRKAP EGSARKTEAQ KQVLEAMSHR LHIDNSVILV GKILFGISRG PEVLNKVRSA 420
  421 GQPLVDDWNC LKNQVRAFER HCGSLSQYGI KHMRSFANIC NAGIQMEQME EAASQACTTL 480
  481 PTGPWSSLNR GFSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle