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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15810425
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGPLDRFTS PCFSNNGEKR EKKSDFEVSE DEKKTRIGGI LKKKSSKSKF RHSLKRRGSR  60
   61 SIDRTLSLTF EDIHDAEELR YVSEFRQSLI SDHLLPPNLD DYHIMLRFLF ARKFDLGKAK 120
  121 LMWTNMIQWR RDFGTDTILE DFEFPELDEV LRYYPQGYHG VDKEGRPVYI ERLGKVDASK 180
  181 LMQVTTLERY LRYHVKEFEK TITVKFPACC IAAKRHIDSS TTILDVQGLG LKNFTKTARD 240
  241 LIIQLQKIDS DNYPETLHRM FIINAGSGFK LLWGTVKSFL DPKTVSKIHV LGNKYQNKLL 300
  301 EMIDASQLPD FFGGTCTCAD QGGCMRSDKG PWKDSEILKM GRSGGTFCRH AGAFLTSDSQ 360
  361 ISSSDKPTYS LKVSDTSTAK SGSELEEMAS PKTNTNNHVP KLTPVSEYAN GNISPTVLSE 420
  421 YEECVPMVDK VVDVAWQLQE MPNASEGPQY TSSLGKIGSV RHIWSWLTAF FISFFTLLAS 480
  481 LALPQTKEHS QLHSSSVRAE LCDERIARES RPPSPPRSTI TERVIISSVL SRLGDLEKQI 540
  541 ENLHSRKSEM PHEKEELLNA AVYRVDALEA ELITTKKALH EALIRQEELL GYIDRQKEAK 600
  601 CRRKKFCW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle