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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28394005, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRIVDNALA VTKESVKTVT YESLNNIARC INGVSALLLT LLPGKANILE GLHGWELRPT  60
   61 FRGPRLPRWM HNGVSSFNEF IHELSVDSDT SSLEYSSGED SDGPLPPSPS SQSSRLSWAS 120
  121 TSASSENHWT EWITFILWWL MFPVRILLWI PQYIISLFYK RSSRIPASPR RHQHSSRPRI 180
  181 SKTNSSKDHD VPNRTTDRRR GVIEDLHLAI EIGIEAIFDF FHKATHLLLS PSEAFAILLS 240
  241 WFSSSSRSPK ENHGEVAYDE TVQTATLGDT DPSPTERPVE SPTRLYNSMN TDTRTCQDVI 300
  301 TELGYPYEAI RVITSDGYVL VLERIPRRDA RKAVFLQHGV LDSSMGWVSN GVVGSPAFAA 360
  361 YDQGYDVFLG NFRGLVSRDH VNKNISSKEF WRYSINEHGT EDIPAMIEKI HEIKTTELKL 420
  421 CQPNIDEEIN QEEPYKLCAI CHSLGGAAIL MYVITRKIKE KPHRLSRLIL LSPAGFHEDS 480
  481 NLGFTIVEYI FLFISPVLAR IVPAFYIPTR FFRMLLNKLA RDFHNYPALG GLVQTLMSYV 540
  541 VGGDSSNWVG VLGLPHYNMN DMPAVSFRVA QHLAQIKHTG KFRMYDYGSR SANMEVYGSP 600
  601 EPLDLGESYK FIDVPVDLVA GRNDKVIRSS MVKKHYNVMR DAEVDVSFNE FEYAHLDFTF 660
  661 SHREELLRYV MSRLLLVKQT PVQQRQTSQK GMKLKKKKKE GTVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle