YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50734100
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWRSAVTAV LMLQPRTALL TTRGPAASYG TSITSAKIQV NGVNLHYQQT GEGSHAVLLL  60
   61 PGMLGSGQTD FGPQLKSMNK KLFTIVAWDP RGYGQSIPPS RDFPPDFFER DAKDAVDLMQ 120
  121 ALKFKKFSLL GWSDGGITAL IAAAKYPALI HKLVVWGANA SVTQEDVRIY NGIRDVSKWS 180
  181 EKVKKPLEEL YGHKYFAETC EAWVDGIARF AEKPGGSICQ QLLPHIQCPT LIIHGEKDPL 240
  241 VPRFHAEYIH EHIKGSRLHL MPEGKHNLHL RFAEEFNREV EEFLR

Type	Start	End	Confidence
Signal Peptide	1	18	0.97
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	285	0.99