YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BL1S5_CHICK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGAGPASPG RSGSALPLPL PLSLSLTGDR KREVPAAGTL LQPIIKDVGE IYSRLLDHRP  60
   61 VIQGEIRYFV KEFEEKRGLR ELRVLENLKK TIFETNEDIL PKCKQSMHDN LNEVLQRLQA 120
  121 ANDTIHKLQE KEHEKRKIQA DKLMAGEEKR IAQQETFLQE QQSKREEVDE EHRKAMERLK 180
  181 EQYSEMEKEL AKYVSF

Type	Start	End	Confidence
Signal Peptide	1	27	0.65
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	196	0.99