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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50733649
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENHGLMER LEKAVTRLES LFSDSQRSGG MECDAMNGVN GSIAPYVEAF DRLLNGSVAE  60
   61 FLRYSKILEG DVKTHAEMVR AAFQAQRSFL VLASQCQEPQ ENEVAVLLKP ISEKIQEIQN 120
  121 FRERNRGSKM FNHLSAVSES IPALGWIAVS PKPGPYVKEM NDAATFYTNR VLKDYKHSDT 180
  181 RHVDWVKSYL NIWSELQAYI KEHHTTGLTW SKTGPVASPT SMRSVLTSGS CLSSPPPPPP 240
  241 PPPGPPPIFD TETPPKDEGT ASRSALFAQL NQGEAITKGL RHVSDDQKTH KNPSLRAQGP 300
  301 PARSPTKSHT PSPTSPKNSP QQSHAPVLEL EGKKWRVEYQ EDKNDLVITN TELKQVAYIF 360
  361 KCNKSTLQIK GKINSITIDN CKKFGLVFDN VVGIVEVINS RDIQIQVMGK VPTISINKTE 420
  421 GCHIYLSEES LDCEIVSAKS SEMNILIPQD GDYKEFPVPE QFKTAWDGSK LVTEPAEIYR 480
  481 SSDSAYPPDG REQLRRGQMA SSSCERKTLD WCLQRLCVLP VKGLRNCCPS VTVKTLQGHL 540
  541 GRRERSIAEV LRRFAPSHGG VGVGRGGGST LTQLRRLWGR NSPHFGGVRT LPSLSAALPR 600
  601 RWAIPSGGTG VGKLLPSRRV VFLGLPCSPP RRVGETKRTL AHARCGRCSA SAAMPEMAES 660
  661 GTEPGTARSG AGAAAMGGLG GESRTDFIRS FRCGLRAAVT SSSEVEGKKA NSDCVGENMW 720
  721 SAQVLPRWAG ERPPPSFQGC RAVLSAPVDG SPSGCAAEAH REQPGREFII PSLAHRFIAE 780
  781 MVDFFILFFI KATIVLSIMH LSGIKDISKF AMHYIIEEID EDTSMEDLQK MMIVALIYRL 840
  841 LVCFYEIICI WGAGGATPGK FLLGLRVVTC DTSVLIAPSR VLVIPSSNVS MTTSTIRALI 900
  901 KNFSIASFFP AFITLLFFQH NRTAYDIVAG TIVVRRNGIR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle