YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50732896
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTESRCPQS PKHKPTPKPN ARSTSKPRTH ARQESRHEQT GPGSALAHRY SPPPFSPAAG  60
   61 RYEQGGDVFL SSSLSARCYQ EGTADVLLAH LLAPPAFKPT SLRYKSHEPP AAALLLLGAA 120
  121 HPEEQPCCAQ PSYHRSTMWH LILWTPHPQW SPKHLKLVTV YVLVLLVSLS FASRQSRPFK 180
  181 HQIDNRSPEI DPFWYVGRGV RPIGRFGKRQ LRGGRGRLRP MSRHLDFILN TLWKQEVLDA 240
  241 EDSDY

Type	Start	End	Confidence
Cytoplasmic	1	153	0.49
Transmembrane Helix	154	172	0.60
Non-Cytoplasmic	173	245	0.83