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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50732862
Protein type: Globular with Signal Peptide
Type Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSPALGRTG ANLVGAIWSS FTVLLEVLIC QCPRHITPEK FYVEACDDGA DDVLAIDRVS  60
   61 TEVTLTVKKD VPPSAVTRPI FGILGTIRLV AGTYLIVITK KKKVGEIFSH AIWKATDFDI 120
  121 LSYKKTMLHL TDIQLQDNKV FLSMISHVLS VDGFYFSTTY DLTHTLQRLA NTSPEFQEMS 180
  181 LLERADPRFV WNGHLLREFA AQPEIHRFAT PVMHGFISMH SCSINGKCFD WLLVSRRSCF 240
  241 RAGVRYYVRG IDSEGHAANF VETEQIVHYK GSKASFVQTR GSIPFFWSQR PNLKYKPKPQ 300
  301 ISKSVNHMDG FQRHFDSQII SYGKQMIVNL VNQKGSELPL EQTFAKMVNS MANGMVRYIA 360
  361 FDFHKECSRM RWDRLQILLD QLAEQQDEFS YFLVDSDGKI VTQQEGTFRS NCMDCLDRTN 420
  421 VIQSLLARRS LQAQLQRLGV LHVGQRIEEQ ADFEKIYKNA WADNANACAK QYAGTGALKT 480
  481 DYTRTGKRTQ WGLIMDGWNS LIRYYKNNFS DGFRQDAIDL FLGNYSVDEV ESASPLHVKK 540
  541 DWKFLALRVG LNTDCSFDRK RSALEVLKKL LLAFLKSASS GKGEILPVTI NDCFLLQKKL 600
  601 VKIFSHTLCR SIDCIITTES LVPRLATGLL LLCSMWLDRL SVTMNTLCFV PRFLMKLSHE 660
  661 TVTIELKNGT QVHGTITGVD VSMNTHLKAV KMTLKNREPV QLETLSIRGN NIRYFILPDS 720
  721 LPLDTLLVDV EPKVKSKKRE AVAGRGRGRG RGRGRGRGRG RGGPRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle