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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14532598, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMDSSFFLT IVAAAFAIGF FIFLRKLRIH QENEDVGSSS TSPPSSLASS TSPPSTLSSS  60
   61 TSHPSSSTSP PSSLSCTGTH HVFPSFRGDD VRRNFLSHIQ KEFRRKGITP FIDNEIRRGE 120
  121 SIGPELIKAI RESKIAIVLL SRNYASSKWC LEELVEIMKC KKEFGLTVFA IFYEVDPSHV 180
  181 KKLTGEFGAV FQKTCKGRTK ENIMRWRQAF EEVATIAGYD SRNWENEAAM IEEIAIEISK 240
  241 RLINSSPFSG FEGLIGMKAH IEKMKQLLCL DSTDERRTVG ISGPSGIGKS TIARVLHNQI 300
  301 SDGFQMSVFM KFKPSYTRPI CSDDHDVKLQ LEQQFLAQLI NQEDIKIHQL GTAQNFVMGK 360
  361 KVLIVLDGVD QLVQLLAMPK AVCLGPGSRI IITTQDQQLL KAFQIKHIYN VDFPPDHEAL 420
  421 QIFCIHAFGH DSPDDGFEKL ATKVTRLAGN LPLGLRVMGS HFRGMSKEDW KGELPRLRIR 480
  481 LDGEIGSILK FSYDVLDDED KDLFLHIACF FNDEGIDHTF EDTLRHKFSN VQRGLQVLVQ 540
  541 RSLISEDLTQ PMHNLLVQLG REIVRNQSVY EPGKRQFLVD GKEICEVLTS HTGSESVIGI 600
  601 NFEVYWSMDE LNISDRVFEG MSNLQFFRFD ENSYGRLHLP QGLNYLPPKL RILHWDYYPM 660
  661 TSLPSKFNLK FLVKIILKHS ELEKLWEGIQ VSIYHSFMKF ILF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle