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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME25_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMQTLNFTS SLLFLSFIFL SCALLISSQQ SPSQPHSEPP SQLPFEPPVE SPFFPPSQPP  60
   61 IFVPPSQPPS LPPSQSQSPS LACKSTPYPK LCRTILNAVK SSPSDPYRYG KFTIKQCLKQ 120
  121 ASRLSKVITS YARRVESKPG SATAEEIGAV ADCGELSELS VNYLETVTTE LKTAQVMTAA 180
  181 LVEHVNSLLS GVVTNQQTCL DGLVEAKSGF AAAIGSPMGN LTRLYSISLG LVSHALNRNL 240
  241 KRFKASKGKI LGGGNSTYRE PLETLIKGLR KTCDNDKDCR KTSRNLGELG ETSGGSILVS 300
  301 KAVIVGPFKS DNFTTITDAI AAAPNNTRPE DGYFVIYARE GVYEEYIVVP INKKNLMLMG 360
  361 DGINKTIITG NHNVVDGWTT YNCSSFAVVG ERFMAVDVTF RNTAGPEKHQ AVALRNNAEG 420
  421 SSFYRCSFEG YQDTLYVHSL RQFYRECDIY GTVDFIFGNA AAIFQNCNIY ARKPMAKQKN 480
  481 AITAHGRLDP NQNTGISIIN CTIKAAPDLA AEPKSAMTFL GRPWKPYSRT VFMQSYISDI 540
  541 VQPVGWLEWN GTIGLDTIYY GEYSNFGPGA NTNQRVQWLG YNLLNLAEAM NFTVYNFTMG 600
  601 DTWLPQTDIP FYGGLLSKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle