YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14334572
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLSVENGGL APGFRFHPTD EELVVYYLKR KIRRKKLRVE AIGETDVYKF DPEELPEKAL  60
   61 YKTRDRQWFF FSLRDRKHGS RSSRATERGY WKATGKDRVI HCDSRPVGEK KTLVFHRGRA 120
  121 PNGERTNWVM HEYTLHKEEL KRCGGEDVKD AYVLYKIYKK SGSGPKNGEQ YGAPFIEEEW 180
  181 AEDDDDDVDE PANQLVVSAS VDNSLWGKGL NQSELDDNDI EELMSQVRDQ SGPTLQQNGV 240
  241 SGLNSHVDTY NLENLEEDMY LEINDLMEPE PGPTSVEVME NNWNEDGSGL LNDDDFVGAD 300
  301 SYFLDLGVTN PQLDFVSGDL KNGFAQSLQV NTSLMTYQAN NNQFQQQSGK NQASNWPLRN 360
  361 SYTRQINNGS SWVQELNNDG LTVTRFGEAP GTGDSSEFLN PVPSGISTTN EDDPSKDESS 420
  421 KFASSVWTFL ESIPAKPAYA SENPFVKLNL VRMSTSGGRF RFTSKSTGNN VVVMDSDSAV 480
  481 KRNKSGGNND KKKKKNKGFF CLSIIGALCA LFWVIIGTMG GSGRPLLW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle