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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50732159
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCARGSAGG SSLRGTERGL RSHARGKQPA PGAAALSEAE VAPLLRMGSS AAFRELPASP  60
   61 AMRKRSKGPG FLVILGLILC CSVLSSVYAL GMIYLTGAGG REVGRQGPED MRLENTGLED 120
  121 MRLEDMGLED MRLEVVELED IGFAEKLEHS PENSGGVSLH TKRISIGVDA AQKGQQKEAG 180
  181 DAGADRLEYY NVLRELSRVK VDADDVITKE EQIFLLLKAK AKCERHLKAK VPKVHDGFCL 240
  241 PEWDGIVCWP EGVPGKVVAM PCPEYIYDFN HKGHAYRRCD LNGSWELVPG NNRTWANYSE 300
  301 CAKFLTNETR EREVFDRLYL IYTVGYSISL GSLTVAVLIL GYFRRLHCTR NYIHMHLFVS 360
  361 FMLRAVSIFV KDAVLYSGSA LEEMERISEE DLKSITEAPP ADKSQFVGCK VAVTFFLYFL 420
  421 ATNYYWILVE GLYLHSLIFM AFFSEKKYLW GFTLFGWGLP AVFVTAWASV RATLADTECW 480
  481 DLSAGNLKWI IQVPILAAIV VNFILFINII RVLATKLRET NAGRCDSRQQ YRKLLKSTLV 540
  541 LMPLFGVHYI VFMAMPYTDV SGILWQVQMH YEMLFNSFQG FFVAIIYCFC NGEVQAEIKK 600
  601 SWSRWTLALD FKRKARSGST TYSYGPMVSH TSITNVATRG ALALHLNTRL IPGTLNGHRN 660
  661 LPGYVKNGSI SENSMPSSGP EQYNKDEEYL NGSGLYDGDR PTVLVEEERE TVM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle