YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50731283
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCGGRGASL LGWVGRAWPG PLPAWVPQPP RALLSPIPRR GLAATLPRNS YDVRRVEITP  60
   61 LEQRKVTFDT HALVRDLETH GFAKEQAETI VSALITLSNV SLETVYKDMV TQAQQEITLQ 120
  121 QIMAHLDSIR KDMVILEKSE FANLRAENEK MKIELDQVKQ QLMNETSKIQ ADSKLDINLE 180
  181 RSRVTDMFTD QERKLMEATT EFHKKDSSTN SIISEISNKI DTEIASLKTL MESNKLDTIR 240
  241 YLAASVFTCL AIALGFYRFW K

Type	Start	End	Confidence
Non-Cytoplasmic	1	237	0.55
Transmembrane Helix	238	260	0.85
Cytoplasmic	261	261	0.52