YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50730085
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALLAKLHP PQSPGPRGPS LLLTPSHAPL PARVERTAGA CALPPRGRRG RRPPAAQSGR  60
   61 GGWSSAALGP APLSAAANMA ARRPRTAPEH ESDDDSYEVL DLTEYARRHH WWNRLFGRNS 120
  121 GPIVEKYSVA TQIVMGGVTG WCAGFLFQKV GKLAATAVGG GFLLLQIASH SGYVQVDWKR 180
  181 VEKDVNKAKK QLKKRANKAA PEINTLIEES TEFIKQNIVV SSGFVGGFLL GLAS

Type	Start	End	Confidence
Cytoplasmic	1	126	0.60
Transmembrane Helix	127	147	0.52
Non-Cytoplasmic	148	152	0.71
Transmembrane Helix	153	174	0.55
Cytoplasmic	175	234	0.48