YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50730068
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFIAFLKTQ FIVHLLIGFV FVVSGLIINF IQLCTLVLWP INKQFYRRVN CRLAYSLWSQ  60
   61 LVMLLEWWSG TECTLFSDEA TVNTFGKEHV IIILNHNFEI DFLCGWTMTE RFGVLGSSKV 120
  121 LAKKELLYVP LIGWTWYFLE IVFCKRKWEE DRDTVIEGLK RLADYPEYMW FLLYCEGTRF 180
  181 TETKHRISME VAESKGLPKL KYHLLPKTKG FTTAVQCLRG TVSAVYDVTL NFRGNKNPSL 240
  241 LGILYGKKYE ANMCVRRFPL EDIPQDEKEA ANWLHKLYQE KDALQEMYNQ EGTFPGQQFK 300
  301 PPRRPWTLVN FLFWATVLLS PLFTFGFGVF ASGSPLLILA FLGFVGAASF GVRRLIGVTE 360
  361 IEKGSSYGNQ EFKKKE

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.84
Transmembrane Helix	12	39	0.83
Cytoplasmic	40	307	0.91
Transmembrane Helix	308	329	0.91
Non-Cytoplasmic	330	335	0.72
Transmembrane Helix	336	357	0.90
Cytoplasmic	358	376	0.98