YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22947847
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASCKQWTVF LSLLCLVSAT VAAPPKKPVA VPFGRNYMPT WAFDHIKYFN GGKEIQLHLD  60
   61 KYTGTGFQSK GNYLFGHFHM QIKMVPGDSA GTVTAYYLSS QNNEHDEIDF EFLGNRTGQP 120
  121 YILQTNVFTG GKGDREQRIF LWFDPTAAYH SYAVLWNLYQ IVFLVDDIPI RVFKNSKDLG 180
  181 VKFPFNQPMK LYSSLWNADD WATRGGLEKT DWSKAPFIAS YRGFHIDGCE ASVEAKYCAT 240
  241 QGKRWWDQKE FQDLDAQQWR RLRWVRKKFT IYNYCTDRVR YPSMPPECKR DRDI

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	294	0.99