YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21717632
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRSRSSAAAK LRGQKRSGAS AAPAASAAAA LAPSATRTRR SASQAGSKSQ AVEKPPSEKP  60
   61 RLRRSSPRAQ EEGPGEPPPP ELALLPPPPP PPPTPATPTS SASNLDLGEQ RERWETFQKR 120
  121 QKLTSEGAAK LLLDTFEYQG LVKHTGGCHC GAVRFEVWAS ADLHIFDCNC SICKKKQNRH 180
  181 FIVPASRFKL LKGAEHITTY TFNTHKAQHT FCKRCGVQSF YTPRSNPGGF GIAPHCLDEG 240
  241 TVRSMVTEEF NGSDWEKAMK EHKTIKNMSK E

Type	Start	End	Confidence
Cytoplasmic	1	16	0.70
Transmembrane Helix	17	35	0.69
Non-Cytoplasmic	36	271	0.99