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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50728916
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRIVEEADT DTAENSCCAI PSGGYSGQNA SKLSLSGGRR NAPRSGAFPE GSGRGEVGTA  60
   61 AVSARRSSRC SVALRAASSG PGTRRRQTPL LKSQVFPSYQ TRGVPERRPA GSHKRERSRG 120
  121 AVLLEASLKL LMGRSVTALG RREFPQQNEF VSKRPGVSLW RRGRPSESGR RAAPRPGQSG 180
  181 TETRKGRGND VNDFHHDCGS RENISRNGCA HKQQCTAVLC LRAYRAEREQ EHLALKFLPA 240
  241 GPGLPGMLVL CWMQHSRNKS SGQPLGLIDA SQAFVYRHKE ALTPLGNHPR CREDPASTTG 300
  301 NARAAICCRL WDSWHRQHTR SYDDTVTQYH PLPSSVDAIT GIRFSRERPL LAVMVLNGPS 360
  361 ARASGVLLHF NSCFSRLCKR ATAEQRPKGE SLPILRNRHS CPKDSRKPLN NVTEAQSDIS 420
  421 LCAHGDGSFF RLGPLGTTTD SKHGFPFMLV SFISIHAAVS ARNPNSGQWC SMRAINCQEL 480
  481 LQPGARGAAG RCHPQPRAAR DVVGSGSMVL LPRPTSPGGG SLRFFQQGDE QGCGAEALSY 540
  541 TGIVWGVQSS LKGEQQQETS PQNCGDRERS LRAAMGKHKK KEEAVFLRKK ITLLRAFSLL 600
  601 IGSMVGSGIF ISPKGVLKNS GTVGFSLVVW FACGLLSMFG ALCYAELGTR ITKSGGHYIY 660
  661 ILETLGPLPS FLFLWAEFFA IRPANSAVVS LAFGRYLLEP FFAPCAAPVP AVKLISLLGY 720
  721 YAVLTLNSWS VTWSARLQTA LSIVKLLALM LIIVPGMMLL AQGHTKNFQD AFDRQSLVPD 780
  781 KLPLAFYAGM FAYSGWFQTS FVREELVRPE RNIPLAVIVS VITVIVGYML TNISYYTALG 840
  841 TQDVLASPAV AVSFVQQACT NLISVVPVLV ALSCFGTMNG GILTFSRTLF VASREGQWPP 900
  901 LFSMIHIRRH TPLPAVMLMF PLVTAMVCIG DIYHLLNFFS FSRWLFIGLA TLGLIVHRYR 960
  961 HPELQSPFKV PLFVPVSFTI ICLFTVAMSI YSDPVNISIG CTMVLSGFPV YYLVIQRKMS1020
 1021 NRCHRLLYYL THKLQQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle