YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49904271, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECRSACVTE FFCRKKKNVK TAVSLTLLFA TLLMLQKLIT VDTNSKDKKV EVKGRWCGPQ  60
   61 CPSFKSKNLK AVENSSHSGG SDSKRALKQL PKKWDVNKIT CTENSTIKTQ LWFRRLSPRF 120
  121 HEFVLHRHCR YFPMLLNHPE KCGGGVDVLV VVKSVIEEHD RREAVRKTWG KEQEIQGLKI 180
  181 KTLFLLGTPA PGKDSRNLQA LVQYEDRTYG DILQWDFMDT FFNLTLKEVN FLRWFSIYCP 240
  241 DVPFIFKGDD DVFVHTKNLV ELIGFRKEEN KVENLIVGDA ILEAKPIRNR QSKYFIPREL 300
  301 YDKRYPPYLG GGGFLMSSQV ARKVFTVSES VELYPIDDVF VGMCLQKLNI VPEVHLGFRT 360
  361 FGIIKRKVTR LNREPCFFRD LIVVHKLVPQ DLLKMWTLVQ NEDLSCARQF VL

Type	Start	End	Confidence
Signal Peptide	1	35	0.53
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	412	0.99